Planteome: Term Details for "base J metabolic process" (GO:0070580)

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Term Information

Accession: GO:0070580
Name: base J metabolic process
Ontology: biological_process
Synonyms: base J metabolism, beta-D-glucosyl-HOMedU metabolic process, beta-D-glucosyl-hydroxymethyluracil metabolism
Alternate IDs: None
Definition: The chemical reactions and pathways involving base J (beta-D-glucosyl-hydroxymethyluracil), a hypermodified thymidine residue found in the genome of kinetoplastid parasites. This modified base is localized primarily to repetitive DNA, namely the telomeres, and is implicated in the regulation of antigenic variation. The base is synthesized in a two-step pathway. Initially, a thymidine residue in DNA is hydroxylated by a thymidine hydroxylase (TH) to form the intermediate hydroxymethyluracil, which is then glucosylated to form base J. Source: PMID:19114062
Comment: None
History: See term history for GO:0070580 at QuickGO
Subset: None
Related: Link to all annotated objects annotated to base J metabolic process.; Link to all direct and indirect annotations to base J metabolic process.; Link to all direct and indirect annotations download (limited to first 10,000) for base J metabolic process.
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BFO:0000001 entity
BFO:0000003 occurrent
BFO:0000015 process
GO:0008150 biological_process
GO:0009987 cellular process
GO:0008152 metabolic process
GO:0044237 cellular metabolic process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0006725 cellular aromatic compound metabolic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0046483 heterocycle metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:0044238 primary metabolic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:0090304 nucleic acid metabolic process
GO:0006259 DNA metabolic process
GO:0043412 macromolecule modification
GO:0006304 DNA modification
GO:0070580 base J metabolic process

Parents of base J metabolic process (GO:0070580)

subject	relation	object
base J metabolic process	is_a	DNA modification (GO:0006304)

This term has no children.

base J metabolic process

Term Information

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Parents of base J metabolic process (GO:0070580)

None.